Fungal Strain Maintenance and Informatics Platform

Built comprehensive strain management system supporting 700+ fungal lines, integrating genomic data, growth metrics, and production outcomes for commercial biomanufacturing.

PythonData ArchitectureBioinformaticsMycology/Bacterial Culturing Protocols

Overview

  • Designed and built a comprehensive strain management system supporting R&D and commercial-scale production operations
  • Platform tracked over 700 fungal strain lines, integrating genomic data, growth metrics, and production outcomes

Key Features

  • Cold storage cryo strain banking system
  • Automated tracking of strain lineage and genealogy
  • Active strain development and maintenance protocols
  • Contamination tracking

Data Architecture

  • SQL database with optimized schema for biological relationships
  • Automated data analysis and organization scripts
  • Real-time data synchronization across laboratory sites
  • Automated backup and version control

Analytics Dashboard

  • Interactive dashboards providing strain performance metrics across different growth conditions
  • Production yield predictions